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===T cell maturation=== The thymus facilitates the maturation of [[T cell]]s, an important part of the [[immune system]] providing [[cell-mediated immunity]].<ref name=GH2016>{{cite book |last1=Hall |first1=John E. | name-list-style = vanc |title=Guyton and Hall textbook of medical physiology |year=2016 |publisher=Elsevier |location=Philadelphia |isbn=978-1-4557-7016-8 |edition=13th|pages=466β7}}</ref> T cells begin as hematopoietic precursors from the bone-marrow, and migrate to the thymus, where they are referred to as [[thymocyte]]s. In the thymus, they undergo a process of maturation, which involves ensuring the cells react against [[antigen]]s ("positive selection"), but that they do not react against antigens found on body tissue ("negative selection").<ref name=GH2016 /> Once mature, T cells emigrate from the thymus to provide vital functions in the immune system.<ref name=GH2016 /><ref name="Robbins9thC6" /> Each T cell has a distinct [[T cell receptor]], suited to a specific substance, called an [[antigen]].<ref name="Robbins9thC6">{{cite book |title=Robbins and Cotran Pathologic Basis of Disease |isbn=9780323296397 |edition=9th (online)|section=Chapter 6. Diseases of the immune system. The normal immune system.|last1=Kumar |first1=Vinay |last2=Abbas |first2=Abul K. |last3=Fausto |first3=Nelson |last4=Aster |first4=Jon C. | name-list-style = vanc |date=2014-08-27 |publisher=Elsevier Health Sciences }}</ref> Most T cell receptors bind to the [[major histocompatibility complex]] on cells of the body. The MHC presents an antigen to the T cell receptor, which becomes active if this matches the specific T cell receptor.<ref name="Robbins9thC6" /> In order to be properly functional, a mature T cell needs to be able to bind to the MHC molecule ("positive selection"), and not to react against antigens that are actually from the tissues of body ("negative selection").<ref name="Robbins9thC6" /> Positive selection occurs in the cortex and negative selection occurs in the medulla of the thymus.<ref name="MDB2019" /> After this process T cells that have survived leave the thymus, regulated by [[sphingosine-1-phosphate]].<ref name="MDB2019" /> Further maturation occurs in the peripheral circulation.<ref name="MDB2019" /> Some of this is because of hormones and [[cytokine]]s secreted by cells within the thymus, including [[thymulin]], [[thymopoietin]], and [[thymosin]]s.<ref name="Wheaters2013" />
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