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===Separation techniques and electrophoresis=== [[Proteomics]], the study of the proteome, has largely been practiced through the separation of proteins by [[two dimensional gel electrophoresis]]. In the first dimension, the proteins are separated by [[isoelectric focusing]], which resolves proteins on the basis of charge. In the second dimension, proteins are separated by [[Molecular mass|molecular weight]] using [[SDS-PAGE]]. The gel is [[Staining|stained]] with [[Coomassie brilliant blue]] or [[Silver staining|silver]] to visualize the proteins. Spots on the gel are proteins that have migrated to specific locations.
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