Editing Farscape (section)

===Season Three===
Having survived Scorpius' attack, the doctor [[Season of Death|saves Crichton]] by using biological material from a suitable donor&nbsp;– an alien called an Interon which may be a cousin species to humans. Scorpius fools Crais into thinking he is dead to cover his escape with the neural chip, and Zhaan revives Aeryn, but at the cost of her own life. Feeling guilty over the death of the Interon donor, Crichton has the donor's still living relative brought aboard&nbsp;– an arrogant scientist called [[Jool]].

Investigating another wormhole, Moya [[Self-Inflicted Wounds Part I: Could'a, Would'a, Should'a|crashes into a ship]] belonging to a race called Pathfinders, experts in wormholes. [[Self-Inflicted Wounds Part II: Wait for the Wheel|Zhaan sacrifices]] the last of her life to separate the ships, adding more guilt to Crichton's conscience. He also discovers that despite the chip's removal, the personality clone Harvey remains in his mind.

Due to a [[Eat Me (Farscape episode)|harrowing encounter]] with another escaped prisoner with a cloning device, Crichton ends up twinned&nbsp;– a duplicate created so that there are two Crichtons, both equal and original. Talyn is attacked by the new Peacekeeper Commando chasing the crew – [[Xhalax Sun]], Aeryn's mother. To escape her, Moya and Talyn starburst [[List of Farscape episodes#Season 3 (2001–2002)|in opposite directions]], splitting the crew, with one Crichton on each ship.

On Moya, tensions rise over D'Argo's [[Suns and Lovers|breakup with]] Chiana, Jool's grating personality, and Crichton's increasing obsession with wormholes. An [[Losing Time|encounter with]] an alien Energy Rider also instils precognitive abilities in Chiana (or possibly only activates already present abilities). Meanwhile, Scorpius [[Incubator (Farscape episode)|tries to access]] the wormhole data, but finds that the chip now contains a neural clone of Crichton, who refuses to allow Scorpius access.

On Talyn, Crais explains that Xhalax wants to recapture him as a renegade Peacekeeper, and to recapture Talyn as a powerful warship. After [[Relativity (Farscape episode)|a vicious battle]], Aeryn allows Crais to kill her mother. Crichton discovers that the mechanic, Furlow, has [[Infinite Possibilities Part I: Daedalus Demands|been working on]] the wormhole data he gave her in the first season, and intends to sell it to the Scarrans. With the help of the Ancients, Crichton unlocks the wormhole knowledge just enough to destroy the Scarran ship, but suffers radiation exposure and [[Infinite Possibilities Part II: Icarus Abides|dies in Aeryn's arms]].

When the two crews [[Fractures (Farscape episode)|finally reunite]], Aeryn cannot face the remaining Crichton, and Talyn is [[I-Yensch, You-Yensch|becoming increasingly violent]] and uncontrollable. Crichton resolves to destroy the wormhole information that Scorpius has by [[Into the Lion's Den Part I: Lambs to the Slaughter|pretending to help him]] and then crippling the project from within. In return for his help, Scorpius grants the Moya crew leniency for their crimes. But high-ranking Peacekeeper Commandant [[Grayza]] interferes, claiming that the Moya crew's continued freedom is an embarrassment and Scorpius' own obsession with wormhole tech does not outweigh their criminal record.

Crichton finally decides that the only way to end Scorpius' project is to [[Into the Lion's Den Part II: Wolf in Sheep's Clothing|destroy the ship]]. Crais orders Talyn to starburst inside the ship, killing them both and destroying the entire Command Carrier. Believing they are finally free from pursuit, the crew buries Talyn's remains and [[Dog with Two Bones|splits up]] to go their own ways. But at the last second, a strange [[Noranti|old woman]] formerly imprisoned on the Command Carrier informs Crichton that Aeryn is pregnant, and Moya is sucked into a wormhole, leaving Crichton once again alone in space.