Editing The Animatrix (section)

=== ''Program'' ===
''Program'' follows the protagonist, Cis, who is engaged in her favorite training simulation: a battle program set in feudal Japan. After she successfully eliminates an attacking enemy cavalry while playing as a [[Onna-bugeisha|samurai woman]], a lone, male [[samurai]] appears whom Cis recognizes as Duo.

Initially, the two duel as allies, simply to test one another's fighting abilities. During the course of their duel, Duo briefly disarms Cis. He questions her concentration and wonders whether she regrets taking the Red Pill that took them out of the "peaceful life of the virtual world". They continue fighting until she finally overpowers Duo. It is at this point that Duo states that he has something he wants to say and that he has blocked the signal so that the operator does not listen. She assumes that he wants to propose marriage, but instead finds out that he desires to return to the Matrix and wants Cis to come with him. When Cis believes he is teasing her, Duo says he's serious and states that he has already contacted the machines and it is the only way to find peace before it is too late. He urges Cis to return with him, but she refuses. Duo becomes more aggressive and forceful in his arguments, saying that he does not care about the truth anymore and how they live their lives is important because what is real does not matter. As Cis becomes incredulous, their battle becomes more serious and violent and they both end up on a rooftop.

When Duo reiterates that the machines are on their way, Cis believes he has betrayed the humans and decides that she needs to do something about it outside the simulation. Terrified, she tries to escape and desperately requests an operator to exit the simulation, but Duo reminds her that no one can hear her. When he offers her to come with him again, she refuses again and Duo, in a flying leap, tries to attack her. As the blade comes towards her, Cis, standing her ground, concentrates and catches the sword and breaks it. She takes the broken end of the blade and stabs Duo directly at the throat, killing him. Remorseful, Duo states his love for her as he bleeds out and dies.

Suddenly, Cis wakes up from the program and discovers that the whole encounter with Duo was a test program devised for training purposes. A man named Kaiser assures her that she acted appropriately during the test and met the test's targets. Clearly upset and traumatized that Duo wasn't real, Cis angrily punches him in the face and walks away. Shocked and impressed by her behavior, Kaiser remarks that "except from that last part, I'd say she passed."