Editing Phylogenetic tree (section)

=== Unrooted tree ===
[[File:MyosinUnrootedTree.jpg|thumb|upright=1.35|An unrooted phylogenetic tree for [[myosin]], a [[gene family|superfamily]] of [[protein]]s<ref name=Hodge_2000>{{cite journal|vauthors=Hodge T, Cope M |title=A myosin family tree|journal=J Cell Sci|volume=113|issue=19|pages=3353–4|date=1 October 2000|doi=10.1242/jcs.113.19.3353|url=http://jcs.biologists.org/cgi/content/full/113/19/3353|pmid=10984423|url-status=live|archive-url=https://web.archive.org/web/20070930043742/http://jcs.biologists.org/cgi/content/full/113/19/3353|archive-date=30 September 2007}}</ref>]]

Unrooted trees illustrate the relatedness of the leaf nodes without making assumptions about ancestry. They do not require the ancestral root to be known or inferred.<ref>{{cite web |url=https://www.ncbi.nlm.nih.gov/Class/NAWBIS/Modules/Phylogenetics/phylo9.html |title="Tree" Facts: Rooted versus Unrooted Trees |access-date=2014-05-26 |url-status=live |archive-url=https://web.archive.org/web/20140414030413/http://www.ncbi.nlm.nih.gov/Class/NAWBIS/Modules/Phylogenetics/phylo9.html |archive-date=2014-04-14 }}</ref> Rooted trees can be generated from unrooted ones by inserting a root. Inferring the root of an unrooted tree requires some means of identifying ancestry. This is normally done by including an outgroup in the input data so that the root is necessarily between the outgroup and the rest of the taxa in the tree, or by introducing additional assumptions about the relative rates of evolution on each branch, such as an application of the [[molecular clock]] [[hypothesis]].<!--- THIS REF IS ____ <ref name=Maher_2002>{{cite journal |author=Maher BA |title=Uprooting the Tree of Life |journal=The Scientist |volume=16 |issue=2 |pages=90–95 |year=2002 |url=http://www.the-scientist.com/yr2002/sep/research1_020916.html |url-status=live |archive-url=https://web.archive.org/web/20031002231607/http://www.the-scientist.com/yr2002/sep/research1_020916.html |archive-date=2003-10-02 |bibcode=2000SciAm.282b..90D |doi=10.1038/scientificamerican0200-90 |pmid=10710791}}</ref> I HOPE THIS ONE IS BETTER---><ref>{{cite journal |author=W. Ford Doolittle |title=Uprooting the Tree of Life |journal=Scientific American |volume=282 |issue=2 |pages=90–95 |year=2002 |bibcode=2000SciAm.282b..90D |doi=10.1038/scientificamerican0200-90 |pmid=10710791 |quote=''No abstract available''}}</ref>