Jump to content
Main menu
Main menu
move to sidebar
hide
Navigation
Main page
Recent changes
Random page
Help about MediaWiki
Special pages
Niidae Wiki
Search
Search
Appearance
Create account
Log in
Personal tools
Create account
Log in
Pages for logged out editors
learn more
Contributions
Talk
Editing
Campylobacter
(section)
Page
Discussion
English
Read
Edit
View history
Tools
Tools
move to sidebar
hide
Actions
Read
Edit
View history
General
What links here
Related changes
Page information
Appearance
move to sidebar
hide
Warning:
You are not logged in. Your IP address will be publicly visible if you make any edits. If you
log in
or
create an account
, your edits will be attributed to your username, along with other benefits.
Anti-spam check. Do
not
fill this in!
== Phylogeny == The currently accepted taxonomy is based on the [[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)<ref name=LPSN>{{cite web| author=A.C. Parte| url=https://lpsn.dsmz.de/genus/campylobacter| title=Campylobacter| access-date=2023-09-09| publisher=[[List of Prokaryotic names with Standing in Nomenclature]] (LPSN)| display-authors=et al.}}</ref> and [[National Center for Biotechnology Information]] (NCBI)<ref name=NCBI>{{cite web| author=Sayers| url=https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Undef&id=194&lvl=3&keep=1&srchmode=1&unlock| title=Campylobacter| access-date=2023-09-09| publisher=[[National Center for Biotechnology Information]] (NCBI) taxonomy database| display-authors=et al.}}</ref> {| class="wikitable" |- ! colspan=1 | 16S rRNA based [[The All-Species Living Tree Project|LTP]]_10_2024<ref>{{cite web|title=The LTP |url=https://imedea.uib-csic.es/mmg/ltp/#LTP| access-date=10 December 2024}}</ref><ref>{{cite web|title=LTP_all tree in newick format| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_all_10_2024.ntree |access-date=10 December 2024}}</ref><ref>{{cite web|title=LTP_10_2024 Release Notes| url=https://imedea.uib-csic.es/mmg/ltp/wp-content/uploads/ltp/LTP_10_2024_release_notes.pdf |access-date=10 December 2024}}</ref> ! colspan=1 | 120 marker proteins based [[Genome Taxonomy Database|GTDB]] 09-RS220<ref name="about">{{cite web |title=GTDB release 09-RS220 |url=https://gtdb.ecogenomic.org/about#4%7C |website=[[Genome Taxonomy Database]]|access-date=10 May 2024}}</ref><ref name="tree">{{cite web |title=bac120_r220.sp_labels |url=https://data.gtdb.ecogenomic.org/releases/release220/220.0/auxillary_files/bac120_r220.sp_labels.tree |website=[[Genome Taxonomy Database]]|access-date=10 May 2024}}</ref><ref name="taxon_history">{{cite web |title=Taxon History |url=https://gtdb.ecogenomic.org/taxon_history/ |website=[[Genome Taxonomy Database]]|access-date=10 May 2024}}</ref> |- | style="vertical-align:top| {{Clade | style=font-size:90%;line-height:90% |label1=''Campylobacter'' |1={{clade |1=''C. canadensis'' |2={{clade |1={{clade |1={{clade |1={{clade |1=''[[Campylobacter lari|C. lari]]'' |2=''C. volucris'' }} |2={{clade |1={{clade |1=''C. armoricus'' |2=''C. peloridis'' }} |2={{clade |1=''C. novaezeelandiae'' |2={{clade |1=''C. cuniculorum'' |2={{clade |1={{clade |1=''C. avium'' |2=''C. troglodytis'' }} |2={{clade |1=''C. helveticus'' |2={{clade |1=''[[Campylobacter upsaliensis|C. upsaliensis]]'' |2=''C. vulpis'' }} }} }} }} }} }} }} |2={{clade |1={{clade |1=''C. insulaenigrae'' |2={{clade |1=''C. bilis'' |2=''C. hepaticus'' }} }} |2={{clade |1={{clade |1=''Campylobacter lari concheus'' |2={{clade |1=''C. ornithocola'' |2=''C. subantarcticus'' }} }} |2={{clade |1=''[[Campylobacter jejuni|C. jejuni]]'' |2={{clade |1=''C. estrildidarum'' |2={{clade |1=''C. aviculae'' |2=''C. taeniopygiae'' }} }} }} }} }} }} |2={{clade |1=''[[Campylobacter coli|C. coli]]'' |2={{clade |1={{clade |1=''Campylobacter hyointestinalis lawsonii'' |2={{clade |1={{clade |1=''[[Campylobacter lanienae|C. lanienae]]'' |2=''C. magnus'' }} |2={{clade |1=''C. iguaniorum'' |2={{clade |1=''[[Campylobacter hyointestinalis|C. hyointestinalis]]'' |2={{clade |1=''Campylobacter fetus testudinum'' |2=''[[Campylobacter fetus|C. fetus]]'' }} }} }} }} }} |2={{clade |1={{clade |1=''C. sputorum'' |2={{clade |1={{clade |1=''C. gracilis'' |2=''C. hominis'' }} |2={{clade |1={{clade |1=''C. blaseri'' |2=''C. geochelonis'' }} |2={{clade |1=''C. portucalensis'' |2={{clade |1=''C. corcagiensis'' |2=''C. ureolyticus'' }} }} }} }} }} |2={{clade |1={{clade |1=''[[Campylobacter rectus|C. rectus]]'' |2={{clade |1=''C. massiliensis'' |2=''[[Campylobacter showae|C. showae]]'' }} }} |2={{clade |1={{clade |1=''C. anatolicus'' |2=''C. curvus'' }} |2={{clade |1=''[[Campylobacter concisus|C. concisus]]'' |2={{clade |1=''C. pinnipediorum'' |2={{clade |1=''[[Campylobacter mucosalis|C. mucosalis]]'' |2={{clade |1=''C. majalis'' |2=''C. suis'' }} }} }} }} }} }} }} }} }} }} }} }} | {{Clade|style=font-size:90%; line-height:90% |label1=''Campylobacter'' |1={{clade |1={{clade |1=''C. canadensis'' <small>Inglis et al. 2007</small> |2={{clade |1={{clade |1={{clade |1=''C. insulaenigrae'' <small>Foster et al. 2004</small> |2=''C. volucris'' <small>Debruyne et al. 2010</small> }} |2={{clade |1=''C. peloridis'' <small>Debruyne et al. 2009 </small> |2={{clade |1=''C. armoricus'' <small>Boukerb et al. 2019</small> |2={{clade |1=''C. subantarcticus'' <small>Debruyne et al. 2010</small> |2={{clade |1=''C. ornithocola'' <small>Caceres et al. 2017</small> |2={{clade |1=''Campylobacter lari concheus'' <small>Debruyne et al. 2009</small> |2=''[[Campylobacter lari|C. lari]]'' <small>corrig. Benjamin et al. 1984</small> }} }} }} }} }} }} |2={{clade |1={{clade |1=''C. avium'' <small>Rossi et al. 2009</small> |2=''C. troglodytis'' <small>Kaur et al. 2023</small> }} |2={{clade |1={{clade |1=''C. helveticus'' <small>Stanley et al. 1993</small> |2={{clade |1=''[[Campylobacter upsaliensis|C. upsaliensis]]'' <small>Sandstedt & Ursing 1991</small> |2=''C. vulpis'' <small>Parisi et al. 2021</small> }} }} |2={{clade |1={{clade |1=''C. cuniculorum'' <small>Zanoni et al. 2009</small> |2=''C. novaezeelandiae'' <small>Bloomfield et al. 2020</small> }} |2={{clade |1={{clade |1=''[[Campylobacter jejuni|C. jejuni]]'' <small>(Jones, Orcutt & Little 1931) Veron & Chatelain 1973</small> |2={{clade |1=''C. bilis'' <small>Phung et al. 2022</small> |2=''C. hepaticus'' <small>Van et al. 2016</small> }} }} |2={{clade |1=''[[Campylobacter coli|C. coli]]'' <small>(Doyle 1948) Veron & Chatelain 1973</small> |2={{clade |1=''C. estrildidarum'' <small>Bryant et al. 2021</small> |2={{clade |1=''C. aviculae'' <small>Bryant et al. 2021</small> |2=''C. taeniopygiae'' <small>Bryant et al. 2021</small> }} }} }} }} }} }} }} }} }} |2={{clade |1={{clade |1={{clade |1=''[[Campylobacter showae|C. showae]]'' <small>Etoh et al. 1993</small> |2={{clade |1=''C. massiliensis'' <small>Antezack et al. 2021</small> |2=''[[Campylobacter rectus|C. rectus]]'' <small>(Tanner et al. 1981) Vandamme et al. 1991</small> }} }} |2={{clade |1={{clade |1=''[[Campylobacter concisus|C. concisus]]'' <small>Tanner et al. 1981</small> |2=''C. curvus'' <small>(Tanner, Listgarten & Ebersole 1984) Vandamme et al. 1991</small> }} |2={{clade |1=''C. anatolicus'' <small>Aydin et al. 2022</small> |2={{clade |1=''C. suis'' <small>Lynch et al. 2022</small> |2={{clade |1=''[[Campylobacter mucosalis|C. mucosalis]]'' <small>(Lawson et al. 1981) Roop et al. 1985</small> |2={{clade |1=''C. majalis'' <small>Lynch et al. 2022</small> |2={{clade |1=''C. pinnipediorum caledonicus'' <small>Gilbert et al. 2017</small> |2=''C. pinnipediorum'' <small>Gilbert et al. 2017</small> }} }} }} }} }} }} }} |2={{clade |1=''C. sputorum'' <small>(Prévot 1940) Veron & Chatelain 1973</small> |2={{clade |1={{clade |1={{clade |1=''C. gracilis'' <small>(Tanner et al. 1981) Vandamme et al. 1995</small> |2=''C. hominis'' <small>Lawson et al. 2001</small> }} |2={{clade |1={{clade |1=''C. blaseri'' <small>Gilbert et al. 2018</small> |2=''C. geochelonis'' <small>Piccirillo et al. 2016</small> }} |2={{clade |1=''C. portucalensis'' <small>Silva et al. 2021</small> |2={{clade |1=''C. corcagiensis'' <small>Koziel et al. 2014</small> |2=''C. ureolyticus'' <small>(Jackson & Goodman 1978) Vandamme et al. 2010</small> }} }} }} }} |2={{clade |1="''Ca.'' C. infans" <small>Bian et al. 2020</small> |2={{clade |1={{clade |1=''[[Campylobacter lanienae|C. lanienae]]'' <small>Logan et al. 2000</small> |2=''C. ovis'' <small>Wang et al. 2023</small> }} |2={{clade |1=''C. iguaniorum'' <small>Gilbert et al. 2015</small> |2={{clade |1={{clade |1=''[[Campylobacter hyointestinalis|C. hyointestinalis]]'' <small>Gebhart et al. 1985</small> |2=''C. hyointestinalis hyointestinalis lawsonii'' <small>On et al. 1995</small> }} |2={{clade |1=''C. fetus testudinum'' <small>Fitzgerald et al. 2014</small> |2=''[[Campylobacter fetus|C. fetus]]'' <small>(Smith & Taylor 1919) Sebald & Veron 1963</small> }} }} }} }} }} }} }} }} }} }} |} Species incertae sedis: * ''C. devanensis'' <small>Miller et al. 2024</small> * "''C. faecalis''" <small>Kachler et al. 2000</small> * "''C. lawrenceae''" <small>Foley et al. 2004</small> * ''C. magnus'' <small>Gruntar et al. 2023</small> * ''C. porcelli'' <small>Miller et al. 2024</small> * ''C. vicugnae'' <small>Miller et al. 2024</small>
Summary:
Please note that all contributions to Niidae Wiki may be edited, altered, or removed by other contributors. If you do not want your writing to be edited mercilessly, then do not submit it here.
You are also promising us that you wrote this yourself, or copied it from a public domain or similar free resource (see
Encyclopedia:Copyrights
for details).
Do not submit copyrighted work without permission!
Cancel
Editing help
(opens in new window)
Search
Search
Editing
Campylobacter
(section)
Add topic
