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==== Phylogenetics ==== * {{cite journal|last1=Bremer|first1=Kåre|last2= Wanntorp |first2=Hans-Erik|author-link=Kare Bremer|title=Phylogenetic Systematics in Botany|journal=Taxon|date=Aug 1978|volume= 27|issue=4|pages=317–329|jstor=1220367|doi=10.2307/1220367}} * {{cite journal|last1=Cantino|first1=Philip D.|first2=James A.|last2=Doyle|first3=Sean W.|last3=Graham|first4=Walter S.|last4=Judd|author-link4=Walter S Judd|first5=Richard G.|last5=Olmstead|first6=Douglas E.|last6=Soltis|author-link6=Douglas E. Soltis|first7=Pamela S.|last7=Soltis|author-link7=Pamela S. Soltis|first8=Michael J.|last8=Donoghue|author-link8=Michael Donoghue|year=2007|title=Towards a phylogenetic nomenclature of ''Tracheophyta''|journal=[[Taxon (journal)|Taxon]]|volume=56|issue=3|pages=822–846|url=http://www.phylodiversity.net/donoghue/publications/MJD_papers/2007/164_Cantino_Taxon07.pdf|archive-url=https://web.archive.org/web/20080705223344/http://www.phylodiversity.net/donoghue/publications/MJD_papers/2007/164_Cantino_Taxon07.pdf|url-status=usurped|archive-date=July 5, 2008|doi=10.2307/25065865|ref={{harvid|Cantino et al|2007}}|jstor=25065865}} * {{cite journal|last1=Chase|first1=Mark W.|author-link1=Mark Wayne Chase|last2=Soltis|first2=Douglas E.|author-link2=Douglas E. Soltis|last3=Olmstead|first3=Richard G.|last4=Morgan|first4=David|last5=Les|first5=Donald H.|last6=Mishler|first6=Brent D.|last7=Duvall|first7=Melvin R.|last8=Price|first8=Robert A.|last9=Hills|first9=Harold G.|last10=Qiu|first10=Yin-Long|last11=Kron|first11=Kathleen A.|last12=Rettig|first12=Jeffrey H.|last13=Conti|first13=Elena|last14=Palmer|first14=Jeffrey D.|last15=Manhart|first15=James R.|last16=Sytsma|first16=Kenneth J.|last17=Michaels|first17=Helen J.|last18=Kress|first18=W. John|last19=Karol|first19=Kenneth G.|last20=Clark|first20=W. Dennis|last21=Hedren|first21=Mikael|last22=Gaut|first22=Brandon S.|last23=Jansen|first23=Robert K.|last24=Kim|first24=Ki-Joong|last25=Wimpee|first25=Charles F.|last26=Smith|first26=James F.|last27=Furnier|first27=Glenn R.|last28=Strauss|first28=Steven H.|last29=Xiang|first29=Qui-Yun|last30=Plunkett|first30=Gregory M.|last31=Soltis|first31=Pamela S.|author-link31=Pamela S. Soltis|last32=Swensen|first32=Susan M.|last33=Williams|first33=Stephen E.|last34=Gadek|first34=Paul A.|last35=Quinn|first35=Christopher J.|last36=Eguiarte|first36=Luis E.|last37=Golenberg|first37=Edward|last38=Learn|first38=Gerald H.|last39=Graham|first39=Sean W.|last40=Barrett|first40=Spencer C. H.|last41=Dayanandan|first41=Selvadurai|last42=Albert|first42=Victor A.|title=Phylogenetics of Seed Plants: An Analysis of Nucleotide Sequences from the Plastid Gene ''rbc''L|journal=[[Annals of the Missouri Botanical Garden]]|date=1993|volume=80|issue=3|pages=528|doi=10.2307/2399846|ref={{harvid|Chase et al|1993}}|jstor=2399846|url=https://spectrum.library.concordia.ca/6741/1/Dayanandan_AnnalsMissouriBotanicalGardens_1993.pdf|hdl=1969.1/179875|hdl-access=free}} * {{cite journal |last=Chase|first=Mark W. |author-link=Mark Wayne Chase|date=2004 |title=Monocot relationships: an overview |journal=[[American Journal of Botany]] |volume=91 |issue=10 |pages=1645–1655 |doi=10.3732/ajb.91.10.1645 |pmid=21652314|doi-access=free }} * {{cite journal|last1=Davis|first1=Jerrold I.|last2=Stevenson|first2=Dennis W.|last3=Petersen|first3=Gitte|last4=Seberg|first4=Ole|last5=Campbell|first5=Lisa M.|last6=Freudenstein|first6=John V.|last7=Goldman|first7=Douglas H.|last8=Hardy|first8=Christopher R.|last9=Michelangeli|first9=Fabian A.|last10=Simmons|first10=Mark P.|last11=Specht|first11=Chelsea D.|last12=Vergara-Silva|first12=Francisco|last13=Gandolfo|first13=María|title=A Phylogeny of the Monocots, as Inferred from ''rbcL'' and ''atpA'' Sequence Variation, and a Comparison of Methods for Calculating Jackknife and Bootstrap Values|url=http://spechtlab.berkeley.edu/sites/default/files/spechtlab/publications/11%20Davis%20et%20al%202004.pdf|journal=Systematic Botany|date=1 July 2004|volume=29|issue=3|pages=467–510|doi=10.1600/0363644041744365|s2cid=13108898|ref={{harvid|Davis et al|2004}}|access-date=14 December 2015|archive-date=23 October 2020|archive-url=https://web.archive.org/web/20201023121800/https://spechtlab.berkeley.edu/sites/default/files/spechtlab/publications/11%20Davis%20et%20al%202004.pdf|url-status=dead}} * {{cite journal|last1=Du|first1=Zhi-Yuan|last2=Wang|first2=Qing-Feng|title=Phylogenetic tree of vascular plants reveals the origins of aquatic angiosperms|journal=Journal of Systematics and Evolution|date=July 2016|volume=54|issue=4|pages=342–348|doi=10.1111/jse.12182|s2cid=83881036|ref={{harvid|Du et al|2016}}|doi-access=free}} * {{cite journal|last1=Duvall|first1=Melvin R.|last2=Clegg|first2=Michael T.|last3=Chase|first3=Mark W.|last4=Clark|first4=W. Dennis|last5=Kress|first5=W. John|last6=Hills|first6=Harold G.|last7=Eguiarte|first7=Luis E.|last8=Smith|first8=James F.|last9=Gaut|first9=Brandon S.|last10=Zimmer|first10=Elizabeth A.|last11=Learn|first11=Gerald H.|author-link3=Mark W Chase|title=Phylogenetic Hypotheses for the Monocotyledons Constructed from ''rbc''L Sequence Data|journal=[[Annals of the Missouri Botanical Garden]]|date=1 January 1993|volume=80|issue=3|pages=607–619|doi=10.2307/2399849|jstor=2399849|s2cid=20316595|url=https://cdr.lib.unc.edu/downloads/qz20t257j }} * {{cite journal|last1=Endress|first1=P. K.|last2=Doyle|first2=J. A.|title=Reconstructing the ancestral angiosperm flower and its initial specializations|journal=[[American Journal of Botany]]|date=8 January 2009|volume=96|issue=1|pages=22–66|doi=10.3732/ajb.0800047|pmid=21628175|doi-access=free}} * {{cite journal |last1=Givnish |first1= Thomas J.|author-link1=Thomas J. Givnish|last2=Pires |first2=J.Chris |last3=Graham |first3=Sean W. |last4=McPherson |first4=Marc A. |last5=Prince |first5=Linda M. |last6=Patterson |first6=Thomas B. |last7=Rai |first7=Hardeep S. |last8=Roalson |first8=Eric H. |last9=Evans |first9=Timothy M. |last10=Hahn |first10=William J |last11=Millam |first11=Kendra C. |last12=Meerow |first12=Alan W |last13=Molvray |first13=Mia |last14=Kores |first14=Paul J. |last15=O'Brien |first15=Heath E. |last16=Hall |first16=Jocelyn C. |last17=Kress |first17=W. John |last18=Sytsma |first18=Kenneth J. |author-link12=Alan Meerow|title=Repeated evolution of net venation and fleshy fruits among monocots in shaded habitats confirms ''a priori'' predictions: evidence from an ''ndhF'' phylogeny |journal=[[Proceedings of the Royal Society B: Biological Sciences]]| year=2005| volume=272 |issue=1571|pages=1481–1490 |pmc=1559828 |pmid=16011923 |doi=10.1098/rspb.2005.3067|ref={{harvid|Givnish et al.|2005}}}} * {{cite journal|last1=Givnish|first1=Thomas J.|author-link1=Thomas J. Givnish|last2=Ames|first2=Mercedes|last3=McNeal|first3=Joel R.|last4=McKain|first4=Michael R.|last5=Steele|first5=P. Roxanne|last6=dePamphilis|first6=Claude W.|last7=Graham|first7=Sean W.|last8=Pires|first8=J. Chris|last9=Stevenson|first9=Dennis W.|last10=Zomlefer|first10=Wendy B.|last11=Briggs|first11=Barbara G.|last12=Duvall|first12=Melvin R.|last13=Moore|first13=Michael J.|last14=Heaney|first14=J. Michael|last15=Soltis|first15=Douglas E.|author-link15=Douglas E. Soltis|last16=Soltis|first16=Pamela S.|author-link16=Pamela S. Soltis|last17=Thiele|first17=Kevin|author-link17=Kevin Thiele|last18=Leebens-Mack|first18=James H.|title=Assembling the Tree of the Monocotyledons: Plastome Sequence Phylogeny and Evolution of Poales|journal=[[Annals of the Missouri Botanical Garden]]|date=27 December 2010|volume=97|issue=4|pages=584–616|doi=10.3417/2010023|s2cid=15036227|url=https://www.biodiversitylibrary.org/part/172229}} * {{cite journal |last1=Givnish |first1=Thomas J. |author-link1=Thomas J. Givnish|last2=Zuluaga |first2=Alejandro |last3=Spalink |first3=Daniel |last4=Soto Gomez |first4=Marybel |last5=Lam |first5=Vivienne K. Y. |last6=Saarela |first6=Jeffrey M. |last7=Sass |first7=Chodon |last8=Iles |first8=William J. D. |last9=de Sousa |first9=Danilo José Lima |last10=Leebens-Mack |first10=James |last11=Chris Pires |first11=J. |last12=Zomlefer |first12=Wendy B. |last13=Gandolfo |first13=Maria A. |last14=Davis |first14=Jerrold I. |last15=Stevenson |first15=Dennis W. |last16=dePamphilis |first16=Claude |last17=Specht |first17=Chelsea D. |last18=Graham |first18=Sean W. |last19=Barrett |first19=Craig F. |last20=Ané |first20=Cécile|author20-link= Cécile Ané |title=Monocot plastid phylogenomics, timeline, net rates of species diversification, the power of multi-gene analyses, and a functional model for the origin of monocots |journal=[[American Journal of Botany]] |date=November 2018 |volume=105 |issue=11 |pages=1888–1910 |doi=10.1002/ajb2.1178|doi-access=free|ref={{harvid|Givnish et al|2018}} |pmid=30368769|hdl=2027.42/146610 |hdl-access=free }} * {{cite journal |last1 =Goremykin|first1= Vadim V. |last2=Hansman|first2= Sabine |last3=Martin|first3=William F. |date=March 1997 |title=Evolutionary analysis of 58 proteins encoded in six completely sequenced chloroplast genomes: revised molecular estimates of two seed plant divergence times |journal= Plant Syst. 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