Editing Mitochondrial DNA (section)

== Mitochondrial sequence databases ==
Several specialized databases have been founded to collect mitochondrial genome sequences and other information. Although most of them focus on sequence data, some of them include phylogenetic or functional information.
* '''AmtDB:''' a database of ancient human mitochondrial genomes.<ref name="AmtDB">{{Cite journal |vauthors=Ehler E, Novotný J, Juras A, Chylenski M, Moravcík O, Paces J |date=January 2019 |title=AmtDB: a database of ancient human mitochondrial genomes |journal=Nucleic Acids Research |volume=47 |issue=D1 |pages=D29–D32 |doi=10.1093/nar/gky843 |pmc=6324066 |pmid=30247677}}</ref>
* '''InterMitoBase''': an annotated database and analysis platform of protein-protein interactions for human mitochondria.<ref name="InterMitoBase">{{Cite journal |display-authors=6 |vauthors=Gu Z, Li J, Gao S, Gong M, Wang J, Xu H, Zhang C, Wang J |date=June 2011 |title=InterMitoBase: an annotated database and analysis platform of protein-protein interactions for human mitochondria |journal=BMC Genomics |volume=12 |page=335 |doi=10.1186/1471-2164-12-335 |pmc=3142533 |pmid=21718467 |doi-access=free}}</ref> (apparently last updated in 2010, but still available)
* '''MitoBreak''': the mitochondrial DNA breakpoints database.<ref name="MitoBreak">{{Cite journal |vauthors=Damas J, Carneiro J, Amorim A, Pereira F |date=January 2014 |title=MitoBreak: the mitochondrial DNA breakpoints database |journal=Nucleic Acids Research |volume=42 |issue=Database issue |pages=D1261–D1268 |doi=10.1093/nar/gkt982 |pmc=3965124 |pmid=24170808}}</ref>
* '''MitoFish''' and '''MitoAnnotator''': a mitochondrial genome database of fish.<ref name="MitoFish">{{Cite journal |display-authors=6 |vauthors=Iwasaki W, Fukunaga T, Isagozawa R, Yamada K, Maeda Y, Satoh TP, Sado T, Mabuchi K, Takeshima H, Miya M, Nishida M |date=November 2013 |title=MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline |journal=Molecular Biology and Evolution |volume=30 |issue=11 |pages=2531–2540 |doi=10.1093/molbev/mst141 |pmc=3808866 |pmid=23955518}}</ref> See also Cawthorn et al.<ref name="Cawthorn">{{Cite journal |vauthors=Cawthorn DM, Steinman HA, Witthuhn RC |date=November 2011 |title=Establishment of a mitochondrial DNA sequence database for the identification of fish species commercially available in South Africa |journal=Molecular Ecology Resources |volume=11 |issue=6 |pages=979–991 |doi=10.1111/j.1755-0998.2011.03039.x |pmid=21689383 |bibcode=2011MolER..11..979C |s2cid=205971257}}</ref>
* '''Mitome:''' a database for comparative mitochondrial genomics in metazoan animals<ref name="Mitome">{{Cite journal |vauthors=Lee YS, Oh J, Kim YU, Kim N, Yang S, Hwang UW |date=January 2008 |title=Mitome: dynamic and interactive database for comparative mitochondrial genomics in metazoan animals |journal=Nucleic Acids Research |volume=36 |issue=Database issue |pages=D938–D942 |doi=10.1093/nar/gkm763 |pmc=2238945 |pmid=17940090}}</ref> (no longer available)
* '''MitoRes:''' a resource of nuclear-encoded mitochondrial genes and their products in metazoa<ref name="MitoRes">{{Cite journal |vauthors=Catalano D, Licciulli F, Turi A, Grillo G, Saccone C, D'Elia D |date=January 2006 |title=MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa |journal=BMC Bioinformatics |volume=7 |page=36 |doi=10.1186/1471-2105-7-36 |pmc=1395343 |pmid=16433928 |doi-access=free}}</ref> (apparently no longer being updated)
* '''MitoSatPlant''': Mitochondrial microsatellites database of viridiplantae.<ref name="MitoSatPlant">{{Cite journal |vauthors=Kumar M, Kapil A, Shanker A |date=November 2014 |title=MitoSatPlant: mitochondrial microsatellites database of viridiplantae |journal=Mitochondrion |volume=19 |issue=Pt B |pages=334–337 |doi=10.1016/j.mito.2014.02.002 |pmid=24561221}}</ref>
* '''MitoZoa''' 2.0: a database for comparative and evolutionary analyses of mitochondrial genomes in Metazoa.<ref name="MitoZoa">{{Cite journal |display-authors=6 |vauthors=D'Onorio de Meo P, D'Antonio M, Griggio F, Lupi R, Borsani M, Pavesi G, Castrignanò T, Pesole G, Gissi C |date=January 2012 |title=MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in Metazoa |journal=Nucleic Acids Research |volume=40 |issue=Database issue |pages=D1168–D1172 |doi=10.1093/nar/gkr1144 |pmc=3245153 |pmid=22123747}}</ref> (no longer available)