Jump to content
Main menu
Main menu
move to sidebar
hide
Navigation
Main page
Recent changes
Random page
Help about MediaWiki
Special pages
Niidae Wiki
Search
Search
Appearance
Create account
Log in
Personal tools
Create account
Log in
Pages for logged out editors
learn more
Contributions
Talk
Editing
Logistic function
(section)
Page
Discussion
English
Read
Edit
View history
Tools
Tools
move to sidebar
hide
Actions
Read
Edit
View history
General
What links here
Related changes
Page information
Appearance
move to sidebar
hide
Warning:
You are not logged in. Your IP address will be publicly visible if you make any edits. If you
log in
or
create an account
, your edits will be attributed to your username, along with other benefits.
Anti-spam check. Do
not
fill this in!
==== Modeling early COVID-19 cases ==== [[File:Combined GLF.jpg|class=skin-invert-image|400px|thumb|[[Generalized logistic function]] (Richards growth curve) in epidemiological modeling]] A [[generalized logistic function]], also called the Richards growth curve, has been applied to model the early phase of the [[COVID-19]] outbreak.<ref>{{Cite journal |last1=Lee|first1=Se Yoon |first2=Bowen |last2=Lei|first3=Bani|last3=Mallick| title = Estimation of COVID-19 spread curves integrating global data and borrowing information|journal=PLOS ONE|year=2020|volume=15 |issue=7 |pages=e0236860 |doi=10.1371/journal.pone.0236860|pmid=32726361 |pmc=7390340 |arxiv=2005.00662 |bibcode=2020PLoSO..1536860L |doi-access=free}}</ref> The authors fit the generalized logistic function to the cumulative number of infected cases, here referred to as ''infection trajectory''. There are different parameterizations of the [[generalized logistic function]] in the literature. One frequently used forms is <math display="block"> f(t ; \theta_1,\theta_2,\theta_3, \xi) = \frac{\theta_1}{{\left[1 + \xi \exp \left(-\theta_2 \cdot (t - \theta_3) \right) \right]}^{1/\xi}}</math> where <math>\theta_1,\theta_2,\theta_3</math> are real numbers, and <math> \xi </math> is a positive real number. The flexibility of the curve <math>f</math> is due to the parameter <math> \xi </math>: (i) if <math> \xi = 1 </math> then the curve reduces to the logistic function, and (ii) as <math> \xi </math> approaches zero, the curve converges to the [[Gompertz function]]. In epidemiological modeling, <math>\theta_1</math>, <math>\theta_2</math>, and <math>\theta_3</math> represent the final epidemic size, infection rate, and lag phase, respectively. See the right panel for an example infection trajectory when <math>(\theta_1,\theta_2,\theta_3)</math> is set to <math>(10000,0.2,40)</math>. [[File:COVID_19_Outbreak.jpg|class=skin-invert-image|right|thumb|400x400px|Extrapolated infection trajectories of 40 countries severely affected by COVID-19 and grand (population) average through May 14th]] One of the benefits of using a growth function such as the [[generalized logistic function]] in epidemiological modeling is its relatively easy application to the [[multilevel model]] framework, where information from different geographic regions can be pooled together.
Summary:
Please note that all contributions to Niidae Wiki may be edited, altered, or removed by other contributors. If you do not want your writing to be edited mercilessly, then do not submit it here.
You are also promising us that you wrote this yourself, or copied it from a public domain or similar free resource (see
Encyclopedia:Copyrights
for details).
Do not submit copyrighted work without permission!
Cancel
Editing help
(opens in new window)
Search
Search
Editing
Logistic function
(section)
Add topic