Jump to content
Main menu
Main menu
move to sidebar
hide
Navigation
Main page
Recent changes
Random page
Help about MediaWiki
Special pages
Niidae Wiki
Search
Search
Appearance
Create account
Log in
Personal tools
Create account
Log in
Pages for logged out editors
learn more
Contributions
Talk
Editing
Telomere
(section)
Page
Discussion
English
Read
Edit
View history
Tools
Tools
move to sidebar
hide
Actions
Read
Edit
View history
General
What links here
Related changes
Page information
Appearance
move to sidebar
hide
Warning:
You are not logged in. Your IP address will be publicly visible if you make any edits. If you
log in
or
create an account
, your edits will be attributed to your username, along with other benefits.
Anti-spam check. Do
not
fill this in!
== Sequences == Experimentally verified and predicted telomere sequence motifs from more than 9000 species are collected in research community curated database [http://cfb.ceitec.muni.cz/telobase/ TeloBase].<ref>{{Cite journal |last1=Lyčka |first1=Martin |last2=Bubeník |first2=Michal |last3=Závodník |first3=Michal |last4=Peska |first4=Vratislav |last5=Fajkus |first5=Petr |last6=Demko |first6=Martin |last7=Fajkus |first7=Jiří |last8=Fojtová |first8=Miloslava |date=2023-08-21 |title=TeloBase: a community-curated database of telomere sequences across the tree of life |url=https://doi.org/10.1093/nar/gkad672 |journal=Nucleic Acids Research |volume=52 |issue=D1 |pages=D311–D321 |doi=10.1093/nar/gkad672 |issn=0305-1048 |pmc=10767889 |pmid=37602392}}</ref> Some of the experimentally verified telomere [[nucleotide]] sequences are also listed in [http://telomerase.asu.edu/sequences_telomere.html Telomerase Database] website (see [[nucleic acid notation]] for letter representations). {| class="wikitable" |+ Some known telomere nucleotide sequences |- ! Group ! Organism ! Telomeric repeat (5' to 3' toward the end) |- | [[Vertebrate]]s | [[Human]], [[mus musculus|mouse]], ''[[Xenopus laevis|Xenopus]]'' | TTAGGG |- | Filamentous [[fungus|fungi]] | ''[[Neurospora crassa]]'' | TTAGGG |- |rowspan="2"| [[Slime mould]]s | ''[[Physarum]]'', ''[[Didymium (slime mould)|Didymium]]'' | TTAGGG |- | ''[[Dictyostelid|Dictyostelium]]'' | AG(1-8) |- | [[Kinetoplastid]] protozoa | ''[[Trypanosoma]]'', ''[[Crithidia]]'' | TTAGGG |- |rowspan="3"| [[Ciliate]] protozoa | ''[[Tetrahymena]]'', ''[[Glaucoma (ciliate)|Glaucoma]]'' | TTGGGG |- | ''[[Paramecium]]'' | TTGGG(T/G) |- | ''[[Oxytricha trifallax|Oxytricha]]'', ''[[Stylonychia]]'', ''[[Euplotes]]'' | TTTTGGGG |- | [[Apicomplexa]]n protozoa | ''[[Plasmodium]]'' | TTAGGG(T/C) |- |rowspan="4"| Higher [[plant]]s | ''[[Arabidopsis thaliana]]'' | TTTAGGG |- | ''[[Cestrum elegans]]'' | TTTTTTAGGG<ref name=Peska2015>{{cite journal | vauthors = Peška V, Fajkus P, Fojtová M, Dvořáčková M, Hapala J, Dvořáček V, Polanská P, Leitch AR, Sýkorová E, Fajkus J | display-authors = 6 | title = Characterisation of an unusual telomere motif (TTTTTTAGGG)n in the plant Cestrum elegans (Solanaceae), a species with a large genome | journal = The Plant Journal | volume = 82 | issue = 4 | pages = 644–54 | date = May 2015 | pmid = 25828846 | doi = 10.1111/tpj.12839 | doi-access = free }}</ref> |- | ''[[Allium]]'' | CTCGGTTATGGG<ref name="Fajkus2016">{{cite journal | vauthors = Fajkus P, Peška V, Sitová Z, Fulnečková J, Dvořáčková M, Gogela R, Sýkorová E, Hapala J, Fajkus J | s2cid = 206331112 | display-authors = 6 | title = Allium telomeres unmasked: the unusual telomeric sequence (CTCGGTTATGGG)n is synthesized by telomerase | journal = The Plant Journal | volume = 85 | issue = 3 | pages = 337–47 | date = February 2016 | pmid = 26716914 | doi = 10.1111/tpj.13115 | doi-access = free }}</ref> |- | [[Green alga]]e ''[[Chlamydomonas]]'' | TTTTAGGG |- | rowspan="3" | [[Insect]]s | ''[[Bombyx mori]]'' | TTAGG |- |''[[Bombus terrestris]]'' |TTAGGTTGGGG<ref name=":3">{{Cite journal |last1=Fajkus |first1=Petr |last2=Adámik |first2=Matej |last3=Nelson |first3=Andrew D L |last4=Kilar |first4=Agata M |last5=Franek |first5=Michal |last6=Bubeník |first6=Michal |last7=Frydrychová |first7=Radmila Čapková |last8=Votavová |first8=Alena |last9=Sýkorová |first9=Eva |last10=Fajkus |first10=Jiří |last11=Peška |first11=Vratislav |date=2023-01-11 |title=Telomerase RNA in Hymenoptera (Insecta) switched to plant/ciliate-like biogenesis |url=https://academic.oup.com/nar/article/51/1/420/6956357 |journal=Nucleic Acids Research |language=en |volume=51 |issue=1 |pages=420–433 |doi=10.1093/nar/gkac1202 |issn=0305-1048 |pmc=9841428 |pmid=36546771}}</ref> |- |''[[Vespula vulgaris]]'' |TTGCGTCTGGG<ref name=":3" /> |- | [[Roundworm]]s | ''[[Ascaris lumbricoides]]'' | TTAGGC |- | Fission [[yeast]]s | ''[[Schizosaccharomyces pombe]]'' | TTAC(A)(C)G(1-8) |- |rowspan="9"| Budding [[yeast]]s | ''[[Saccharomyces cerevisiae]]'' | TGTGGGTGTGGTG (from RNA template)<br /> or G(2-3)(TG)(1-6)T (consensus) |- | ''[[Saccharomyces castellii]]'' | TCTGGGTG |- | ''[[Candida glabrata]]'' | GGGGTCTGGGTGCTG |- | ''[[Candida albicans]]'' | GGTGTACGGATGTCTAACTTCTT |- | ''[[Candida tropicalis]]'' | GGTGTA[C/A]GGATGTCACGATCATT |- | ''[[Candida maltosa]]'' | GGTGTACGGATGCAGACTCGCTT |- | ''[[Candida guillermondii]]'' | GGTGTAC |- | ''[[Candida pseudotropicalis]]'' | GGTGTACGGATTTGATTAGTTATGT |- | ''[[Kluyveromyces lactis]]'' | GGTGTACGGATTTGATTAGGTATGT |}
Summary:
Please note that all contributions to Niidae Wiki may be edited, altered, or removed by other contributors. If you do not want your writing to be edited mercilessly, then do not submit it here.
You are also promising us that you wrote this yourself, or copied it from a public domain or similar free resource (see
Encyclopedia:Copyrights
for details).
Do not submit copyrighted work without permission!
Cancel
Editing help
(opens in new window)
Search
Search
Editing
Telomere
(section)
Add topic